MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
19428wB2_HT4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 288
bases: 2,382,433 bps
CDS: 2,042
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 2,093
Total number of protein coding genes annotated/found:
2,042
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5042|JADGLI010000003.1
SEQF5042_01246
Genome Viewer
NA
AA
3498/1166
11733-8236
Transcription-repair-coupling factor
SEQF5042|JADGLI010000011.1
SEQF5042_00063
Genome Viewer
NA
AA
3363/1121
28640-25278
Chromosome partition protein Smc
SEQF5042|JADGLI010000010.1
SEQF5042_00029
Genome Viewer
NA
AA
3246/1082
32734-35979
ATP-dependent helicase/deoxyribonuclease subunit B
SEQF5042|JADGLI010000007.1
SEQF5042_01888
Genome Viewer
NA
AA
3180/1060
15912-12733
Carbamoyl-phosphate synthase large chain
SEQF5042|JADGLI010000006.1
SEQF5042_01840
Genome Viewer
NA
AA
3177/1059
65566-62390
hypothetical protein
SEQF5042|JADGLI010000012.1
SEQF5042_00102
Genome Viewer
NA
AA
3114/1038
13255-16368
hypothetical protein
SEQF5042|JADGLI010000026.1
SEQF5042_00863
Genome Viewer
NA
AA
3108/1036
3440-6547
Error-prone DNA polymerase
SEQF5042|JADGLI010000047.1
SEQF5042_01441
Genome Viewer
NA
AA
3096/1032
5261-8356
Type I restriction enzyme EcoR124II R protein
SEQF5042|JADGLI010000039.1
SEQF5042_01226
Genome Viewer
NA
AA
3090/1030
6335-9424
RNA polymerase-associated protein RapA
SEQF5042|JADGLI010000005.1
SEQF5042_01690
Genome Viewer
NA
AA
3084/1028
49169-46086
hypothetical protein
SEQF5042|JADGLI010000062.1
SEQF5042_01756
Genome Viewer
NA
AA
3012/1004
1904-4915
ATP-dependent RecD-like DNA helicase
SEQF5042|JADGLI010000032.1
SEQF5042_01121
Genome Viewer
NA
AA
2799/933
19678-22476
Isoleucine--tRNA ligase
SEQF5042|JADGLI010000021.1
SEQF5042_00723
Genome Viewer
NA
AA
2739/913
34221-36959
hypothetical protein
SEQF5042|JADGLI010000020.1
SEQF5042_00659
Genome Viewer
NA
AA
2709/903
6194-3486
Translation initiation factor IF-2
SEQF5042|JADGLI010000004.1
SEQF5042_01536
Genome Viewer
NA
AA
2700/900
78825-76126
hypothetical protein
SEQF5042|JADGLI010000008.1
SEQF5042_02012
Genome Viewer
NA
AA
2697/899
55925-53229
Phosphoenolpyruvate carboxylase
SEQF5042|JADGLI010000008.1
SEQF5042_01999
Genome Viewer
NA
AA
2694/898
42225-39532
Calcium-transporting ATPase 1
SEQF5042|JADGLI010000017.1
SEQF5042_00404
Genome Viewer
NA
AA
2673/891
42707-40035
Aconitate/2-methylaconitate hydratase
SEQF5042|JADGLI010000004.1
SEQF5042_01540
Genome Viewer
NA
AA
2664/888
84058-81395
Valine--tRNA ligase
SEQF5042|JADGLI010000060.1
SEQF5042_01746
Genome Viewer
NA
AA
2655/885
1478-4132
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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